{"id":1431,"date":"2019-10-15T18:11:00","date_gmt":"2019-10-15T18:11:00","guid":{"rendered":"https:\/\/coolblues.bcmultistaging.wpenginepowered.com\/?p=1431"},"modified":"2026-01-20T22:34:36","modified_gmt":"2026-01-20T22:34:36","slug":"dna-clock-help-measure-development-children","status":"publish","type":"post","link":"https:\/\/www.bcchr.ca\/kobor-lab\/2019\/10\/15\/dna-clock-help-measure-development-children\/","title":{"rendered":"New DNA \u201cclock\u201d could help measure development in young children"},"content":{"rendered":"<p class=\"fndry-paragraph fndry-text-intro22\">Scientists have developed a molecular \u201cclock\u201d that could reshape how pediatricians measure and monitor childhood growth and potentially allow for an earlier diagnosis of life-altering development disorders.<\/p>\n\n<p class=\"fndry-paragraph\">The research, published this week in\u00a0<a href=\"https:\/\/www.pnas.org\/content\/early\/2019\/10\/09\/1820843116\"><em>PNAS<\/em><\/a>, describes how the addition of chemical tags to DNA over time can potentially be used to screen for developmental differences and health problems in children.<\/p>\n\n\n<div class=\"wp-block-media-text has-media-on-the-right is-stacked-on-mobile\" style=\"grid-template-columns:auto 25%\"><div class=\"wp-block-media-text__content\">\n<p class=\"wp-block-paragraph\">The study was led by researchers at BC Children\u2019s Hospital, the University of British Columbia (UBC) and the University of California, Los Angeles. It is the first study to describe a method specifically designed for children, called the Pediatric-Buccal-Epigenetic (PedBE) clock, which measures chemical changes to determine the biological age of a child\u2019s DNA.<\/p>\n<\/div><figure class=\"wp-block-media-text__media\"><img loading=\"lazy\" decoding=\"async\" width=\"500\" height=\"500\" src=\"https:\/\/www.bcchr.ca\/kobor-lab\/files\/2025\/01\/Kobor-Michael-March-2017.jpg\" alt=\"\" class=\"wp-image-2035 size-full\" srcset=\"https:\/\/www.bcchr.ca\/kobor-lab\/files\/2025\/01\/Kobor-Michael-March-2017.jpg 500w, https:\/\/www.bcchr.ca\/kobor-lab\/files\/2025\/01\/Kobor-Michael-March-2017-300x300.jpg 300w, https:\/\/www.bcchr.ca\/kobor-lab\/files\/2025\/01\/Kobor-Michael-March-2017-150x150.jpg 150w\" sizes=\"(max-width: 500px) 100vw, 500px\" \/><\/figure><\/div>\n\n\n<p class=\"fndry-paragraph\"><br>Small chemical changes to DNA, known as epigenetic changes, alter how genes are expressed in certain tissues and cells. Some of these changes happen as a person ages and others may be in response to a person\u2019s environment or life experiences.\u00a0<\/p>\n\n<div  class=\"fndry-container fndry-responsive-bg fndry-responsive-border fndry-pt--3 fndry-pb--3 fndry-pr--md-1 fndry-pl--md-1 fndry-pt--sm-0 fndry-pb--sm-0 fndry-mt--sm-3 fndry-mb--sm-3\">\n\t<div class=\"fndry-row\">\n\t<div  class=\"fndry-col fndry-responsive-bg fndry-col--12 fndry-col--sm-12 fndry-col--md-12 fndry-pl--sm-0\">\n\t<div  class=\"fndry-container fndry-responsive-bg fndry-responsive-border fndry-pt--3 fndry-pr--3 fndry-pb--3 fndry-pl--3 fndry-pt--sm-2 fndry-pr--sm-2 fndry-pb--sm-2 fndry-pl--sm-2\" style=\"--fndry-bg:var(--fndry-color-light)\">\n\t<figure  class=\"fndry-quote fndry-quote--left\">\n\t<blockquote class=\"fndry-quote__quote\">\n\t\t<p class=\"fndry-text-intro22\">\u201cWe have a good idea how these DNA changes occur in adults, but until now we didn\u2019t have a tool that was specific for children.&#8221;<\/p>\t<\/blockquote>\n\t<figcaption  class=\"fndry-quote__citation\">\n\t\t&#8211; Dr. Michael Kobor\t<\/figcaption>\n<\/figure><\/div>\n<\/div>\n<\/div><\/div>\n\n\n<p class=\"fndry-paragraph\">In adults, these patterns of epigenetic changes are well established. They can be used to accurately predict a person\u2019s age from a DNA sample or, if a person\u2019s epigenetic age differs from their actual age, it can point to differences in health, including age-related diseases and early mortality. \u201cWe have a good idea how these DNA changes occur in adults, but until now we didn\u2019t have a tool that was specific for children,\u201d says\u00a0<a href=\"https:\/\/www.bcchr.ca\/mkobor\">Dr. Michael Kobor<\/a>, investigator at BC Children\u2019s and senior author of study. \u201cThese DNA changes occur at very different rates in kids and so we adapted this technique for younger ages.\u201d<\/p>\n\n<p class=\"fndry-paragraph\">Dr. Kobor is an investigator at BC Children\u2019s Hospital and the Centre for Molecular Medicine and Therapeutics, a professor in the Department of Medical Genetics at the University of British Columbia, the Tier 1 Canada Research Chair in Social Epigenetics and the Sunny Hill BC Leadership Chair in Child Development.<\/p>\n\n\n<div class=\"wp-block-media-text has-media-on-the-right is-stacked-on-mobile\" style=\"grid-template-columns:auto 25%\"><div class=\"wp-block-media-text__content\">\n<p class=\"wp-block-paragraph\">The PedBE clock was developed using DNA methylation profiles from 1,032 healthy children whose ages ranged from a few weeks old to 20 years. The researchers found 94 different sites in the genome that, when tested together, could accurately predict a child\u2019s age to within about four months. The team also found that children who spent longer in the womb showed an accelerated rate of DNA change by three months, demonstrating that this tool could be used to indicate an infant\u2019s developmental stage. The analysis can be done cheaply and efficiently on cells collected from a cheek swab.<\/p>\n<\/div><figure class=\"wp-block-media-text__media\"><img loading=\"lazy\" decoding=\"async\" width=\"600\" height=\"600\" src=\"https:\/\/www.bcchr.ca\/kobor-lab\/files\/2025\/01\/lisa-mcewen.jpg\" alt=\"\" class=\"wp-image-2465 size-full\" srcset=\"https:\/\/www.bcchr.ca\/kobor-lab\/files\/2025\/01\/lisa-mcewen.jpg 600w, https:\/\/www.bcchr.ca\/kobor-lab\/files\/2025\/01\/lisa-mcewen-300x300.jpg 300w, https:\/\/www.bcchr.ca\/kobor-lab\/files\/2025\/01\/lisa-mcewen-150x150.jpg 150w\" sizes=\"(max-width: 600px) 100vw, 600px\" \/><\/figure><\/div>\n\n\n<div  class=\"fndry-container fndry-responsive-bg fndry-responsive-border fndry-pt--3 fndry-pb--3 fndry-pr--md-1 fndry-pl--md-1 fndry-pt--sm-0 fndry-pb--sm-0 fndry-mt--sm-3 fndry-mb--sm-3\">\n\t<div class=\"fndry-row\">\n\t<div  class=\"fndry-col fndry-responsive-bg fndry-col--12 fndry-col--sm-12 fndry-col--md-12 fndry-pl--sm-0\">\n\t<div  class=\"fndry-container fndry-responsive-bg fndry-responsive-border fndry-pt--3 fndry-pr--3 fndry-pb--3 fndry-pl--3 fndry-pt--sm-2 fndry-pr--sm-2 fndry-pb--sm-2 fndry-pl--sm-2\" style=\"--fndry-bg:var(--fndry-color-light)\">\n\t<figure  class=\"fndry-quote fndry-quote--left\">\n\t<blockquote class=\"fndry-quote__quote\">\n\t\t<p class=\"fndry-text-intro22\">\u201cThis powerful and easy-to-use tool could be used by clinicians to identify why some children aren\u2019t meeting early milestones and potentially diagnose children with developmental disorders earlier in life.&#8221;<\/p>\t<\/blockquote>\n\t<figcaption  class=\"fndry-quote__citation\">\n\t\t&#8211; Dr. Lisa McEwen\t<\/figcaption>\n<\/figure><\/div>\n<\/div>\n<\/div><\/div>\n\n\n<p class=\"fndry-paragraph\">\u201cThis powerful and easy-to-use tool could be used by clinicians to identify why some children aren\u2019t meeting early milestones and potentially diagnose children with developmental disorders earlier in life,\u201d says Dr. Lisa McEwen, first author on the study. \u201cThis would enable doctors and pediatricians to intervene sooner in a child\u2019s life leading to better outcomes for kids.\u201d\u00a0<\/p>\n\n<p class=\"fndry-paragraph\">In a small pilot study, the researchers also found that children with autism spectrum disorder (ASD) showed a higher PedBE \u201cage\u201d than those considered to be developing typically, suggesting that the clock could be used to screen for ASD.&nbsp;<\/p>\n\n<p class=\"fndry-paragraph\">\u201cThe fact that our pediatric clock was able to distinguish between typically developing children and those with autism in this small experiment demonstrates the powerful potential of this tool,\u201d says Dr. Kobor. \u201cAlthough more research is needed to confirm this, these results show that the PedBE clock could be an important factor in evaluating how children develop.\u201d<\/p>\n\n<p class=\"fndry-paragraph\">The researchers made the tool freely available along with the publication of this study so other research teams are able to use and experiment with the tool right away.<\/p>\n\n<p class=\"fndry-paragraph\"><strong>Learn More:<\/strong><\/p>\n\n<p class=\"fndry-paragraph\"><a href=\"https:\/\/www.pnas.org\/content\/early\/2019\/10\/09\/1820843116\">The PedBE clock accurately estimates DNA methylation age in pediatric buccal cells<\/a><br>Lisa M. McEwen, Kieran J. O\u2019Donnell, Megan G. McGill, Rachel D. Edgar, Meaghan J. Jones, Julia L. MacIsaac, David Tse Shen Lin, Katia Ramadori, Alexander Morin, Nicole Gladish, Elika Garg, Eva Unternaehrer, Irina Pokhvisneva, Neerja Karnani, Michelle Z. L. Kee, Torsten Klengel, Nancy E. Adler, Ronald G. Barr, Nicole Letourneau, Gerald F. Giesbrecht, James N. Reynolds, Darina Czamara, Jeffrey M. Armstrong, Marilyn J. Essex, Carolina de Weerth, Roseriet Beijers, Marieke S. Tollenaar, Bekh Bradley, Tanja Jovanovic, Kerry J. Ressler, Meir Steiner, Sonja Entringer, Pathik D. Wadhwa, Claudia Buss, Nicole R. Bush, Elisabeth B. Binder, W. Thomas Boyce, Michael J. Meaney, Steve Horvath, Michael S. Kobor<br>Proceedings of the National Academy of Sciences Oct 2019, 201820843;<br>DOI:&nbsp;<a href=\"https:\/\/doi.org\/10.1073\/pnas.1820843116\" target=\"_blank\" rel=\"noreferrer noopener\">10.1073\/pnas.1820843116<\/a><\/p>","protected":false},"excerpt":{"rendered":"<p>Scientists have developed a molecular \u201cclock\u201d that could reshape how pediatricians measure and monitor childhood growth and potentially allow for an earlier diagnosis of life-altering development disorders.<\/p>\n","protected":false},"author":2,"featured_media":2466,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_lmt_disableupdate":"","_lmt_disable":"","inline_featured_image":false,"footnotes":"","fndry_alternate_title":""},"categories":[10],"tags":[],"class_list":["post-1431","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-news"],"modified_by":"Andrea Sakamoto","_links":{"self":[{"href":"https:\/\/www.bcchr.ca\/kobor-lab\/wp-json\/wp\/v2\/posts\/1431","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.bcchr.ca\/kobor-lab\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.bcchr.ca\/kobor-lab\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.bcchr.ca\/kobor-lab\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/www.bcchr.ca\/kobor-lab\/wp-json\/wp\/v2\/comments?post=1431"}],"version-history":[{"count":1,"href":"https:\/\/www.bcchr.ca\/kobor-lab\/wp-json\/wp\/v2\/posts\/1431\/revisions"}],"predecessor-version":[{"id":2467,"href":"https:\/\/www.bcchr.ca\/kobor-lab\/wp-json\/wp\/v2\/posts\/1431\/revisions\/2467"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/www.bcchr.ca\/kobor-lab\/wp-json\/wp\/v2\/media\/2466"}],"wp:attachment":[{"href":"https:\/\/www.bcchr.ca\/kobor-lab\/wp-json\/wp\/v2\/media?parent=1431"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.bcchr.ca\/kobor-lab\/wp-json\/wp\/v2\/categories?post=1431"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.bcchr.ca\/kobor-lab\/wp-json\/wp\/v2\/tags?post=1431"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}